Curr Cardiovasc Imaging Rep (2012) 5:109–115DOI 10.1007/s12410-012-9122-z
CARDIAC MAGNETIC RESONANCE (E NAGEL, SECTION EDITOR)
Cardiovascular Magnetic Resonance of MyocardialStructure, Function, and Perfusion in Mouse and Rat Models
Frank Kober & Monique Bernard & Thomas Troalen &Thibaut Capron
# Springer Science+Business Media, LLC 2012
Abstract This review summarizes small-animal cardiovas-
Keywords Cardiovascular magnetic resonance . MRI .
cular magnetic resonance (CMR) techniques that are being
Perfusion . Self-gating . Function . Late-enhancement .
actively developed at present. Taking into account with few
exceptions only literature of the past 2 years it shows thatsmall-animal CMR has become an important and versatileanalysis tool in many biomedical studies. The relatively
complex signal formation and detection in magnetic reso-nance offers numerous ways of creating and modulating
The years 2010–2011 were particularly rich in the field of
image contrast as a function of the specific needs. Although
small-animal cardiovascular magnetic resonance (CMR).
most new small-animal CMR developments are done within
Indeed, not only method developments, but also preclinical
the scientific MR community, the MR manufacturers have
applications of more and more complex MR modalities have
readily contributed in making these techniques robust and
received growing attention. This article provides a compre-
available for routine application studies. Unlike other car-
hensive overview of new developments and applications in
diovascular imaging techniques, CMR is used in many
small-animal CMR over this period and outlines the reasons
facets to assess morphology, global and regional function,
for the rapid growth of this research field.
blood flow, myocardial structure, cell damage, metabolism,and other molecular processes for studying mouse and ratmodels of human disease as well as general biochemical
Improved animal MR scanner hardware and software havebeen made available by the manufacturers and have greatlyeased standard functional imaging of the rodent heart. Theimpact of ready-to-use self-gating strategies that had been
developed in the preceding years is clearly visible. Also,
F. Kober (*) M. Bernard T. Troalen T. CapronCentre de Résonance Magnétique Biologique et Médicale
obtaining better image quality in less time was possible by
(CRMBM), UMR CNRS n 6612, Faculté de Médecine,
both higher magnetic fields and commercially available
parallel acquisition hardware (array coils, parallel receivers)
and software (k-space acceleration), which were originally
Cedex 5, Francee-mail: [email protected]
set up on clinical systems. The advantages of these twostrategies have allowed not only improved cardiac functional
M. Bernarde-mail: [email protected]
cine-imaging, but also to perform quantitative T1 mappingfaster.
T. Troalene-mail: [email protected]
The use of clinical MR operating systems combined with
high-field animal magnets has offered access to more com-
T. Caprone-mail: [email protected]
plex base acquisition sequences serving as starting point for
Curr Cardiovasc Imaging Rep (2012) 5:109–115
further developments. Efforts are being made to make myo-
function assessment than in clinical CMR, in which balanced
cardial diffusion MRI applicable in vivo, which is again
SSFP (bright-blood) and detection arrays are used in most
helped by the availability of high-performance gradient
cases. In small-animal CMR, a number of acquisition setups
provide images of very different contrast. Surface detectioncoils are widely used leading to spatially varying image signal
content, and the flow of LV chamber blood causes strongerperturbations especially in the diastolic LV filling phase. For
Self-gating is a retrospective technique using either a navi-
these reasons and because small-animal CMR is a compara-
gator scan preceding each acquisition or the total signal
tively young technique, the number of commercially available
content of the MR signal itself as physiological reference.
segmentation software packages dedicated to small-animal
This reference signal is then used for reordering the acquired
CMR is still low. A recent study compared LV morphological
data as needed ]. Self-gating is particularly beneficial
and functional parameters obtained manually and with differ-
for dynamic imaging, ie, cine-CMR at high heart rates such
ent segmentation algorithms [. The underlying data were
as those of small rodents, and there are now commercially
obtained from healthy and infarcted rats at 9.4T using a
available implementations by major manufacturers. This has
multi-slice gradient echo bright-blood sequence with short
greatly eased standard CMR since cumbersome ECG prepa-
echo-time, respiratory gating, and array-coil detection. Results
rations and equipment are no longer required to perform
on LV volumes were found with less than 10% error versus
standard cine-imaging. But even for laboratories equipped
with working ECG setups, self-gating can be an advantage. The fact that certain mouse models such as infarction or heart
failure may have strongly attenuated ECG signals gives anadvantage to the self-gating strategy. From an acquisition
All different approaches to assess regional function are well
point of view, the trade-off in self-gating are longer echo times
known from clinical CMR, but have also been shown to be
and repetition times, whereas the magnetization steady-state is
feasible in small-animal MR. Whereas classical SPAMM
maintained, leading to a stable signal amplitude throughout
tagging [, ] and DENSE [, are methods for encoding
the cardiac cycle. Bovens and coworkers [have indeed
displacements and strain directly, tissue phase contrast MR
found better signal-to-noise ratios with self-gating compared
relies on velocity encoding by bipolar gradients.
with prospective ECG-gating, mainly owing to the uninter-
All three approaches are currently developed in parallel.
One challenge in tissue phase contrast is that tissue velocitiesare comparatively small requiring strong bipolar gradients if
the echo time and repetition time should not become signifi-cantly longer. On the other hand, the spatial resolution of the
The continuing efforts toward using higher fields have led to
strain maps corresponds to that of the raw images as opposed
reduced scan times, and have made parallel detection a
to classical SPAMM, in which the tagging grid spacing rep-
useful addition to scanners ]. In particular, 3D func-
resents a resolution limit. Animal scanners today are equipped
tional assessment of the mouse heart using self-gating has
with adequate gradient coils making tissue phase contrast
been shown to benefit from k-space accelerated acquisition
MRI feasible. Recent work on this technique has improved
[•]. The two different approaches cannot be compared
temporal resolution and provided all directional velocity com-
straightforward, since the first one is on rats with ECG and
ponents in a time-resolved manner ]. Black-blood prepa-
respiratory gating at 9.4T, and the more recent one on mice
ration has still been judged necessary for obtaining the best
using self-gating at 4.7T. Nevertheless, an interesting obser-
results. DENSE has also no intrinsic limitations by the tagging
vation is that in both studies, roughly threefold scan time
grid. There is no limitation in detecting small displacements
reductions were shown to be possible without compromising
like in tissue phase contrast. Due to the use of stimulated
functional assessment quality. Both studies report imaging
echoes, however, a signal loss of a factor of 2 is intrinsic. A
times of less than 10 min (6 min in mice at 4.7T, 3 min in rats
study using multi-phase DENSE at rest and under dobutamine
at 9.4T) to cover the entire left ventricle.
stress showed improved strain calculation with respect to
By acquiring more and more precise data with an increasing
classical SPAMM tagging analysis and illustrated the impact
number of slices across the LV, automatic cardiac segmentation
of the increased cardiac workload on strain.
tools become increasingly important. Automatic segmentationfor animal CMR is more demanding and more dependent on
individual experimental setups than in clinical CMR. Despitecomparable overall image quality, more variation is found for
The feasibility of adenosine stress along with reasonable
scanner hardware, field strength, and sequences used for global
perfusion reserve values has been shown in rats under
Curr Cardiovasc Imaging Rep (2012) 5:109–115
isoflurane anesthesia, and the commonly used FAIR ASL
demonstrating the usefulness of k-space–accelerated acqui-
approach has been confronted to microsphere MBF measure-
sition for small-animal CMR. Makowski et al. •] used a
ments yielding very good agreement ]. Respiratory gating
k-t SENSE approach on a clinical 3T scanner. Fermi-
and stability against heart-rate variations during acquisition of
function deconvolution of the image signal dynamics was
ASL data have been improved ], though at the expense of
then used to quantify regional MBF yielding values compa-
rable to previous ASL findings although no perfusion maps
All small-animal myocardial ASL studies published so
were calculated. The study also showed a perfusion drop in
far made use of flow-sensitive alternating inversion-
the infarcted myocardium, whose extent was confirmed by
recovery (FAIR) as labeling technique combined with a
histology. Coolen et al. [] used a four-element detection
look-locker readout. This was first implemented by Belle
coil and GRAPPA k-space acceleration allowing for a 64×
et al. [and later improved with respect to resolution and
64 pixel image to be acquired within three heart beats, ie, a
robustness to motion , ]. More recently, this FAIR
temporal resolution of roughly 400 ms with a 15 ms window
look-locker acquisition technique has been improved by
within the cardiac cycle. Likely owing to a dedicated gradi-
Vandsburger et al. [], who have used fuzzy C-means
ent system with higher performance, the final temporal
clustering for a more accurate calculation of inversion times
resolution appears better than in the clinical system’s k-t-
in a context of heart rate variations during acquisition. The
accelerated approach. This study, however, did not attempt
authors also used an interleaved spiral acquisition for read-
absolute quantification, and therefore no literature compar-
out, replacing the previously used Cartesian FLASH read-
out, which as all radial approaches, has the advantage thatall signals contributing to the final image represent an
equally weighted portion of k-space. Using this technique,the authors have obtained perfusion maps from mice with
Beyond visualization of necrosis in myocardial infarction
coronary occlusion, and the hypoperfused regions were
(MI), late gadolinium-enhanced (LGE) MRI can be used to
compared with late Gd-enhanced MRI. The regional delin-
assess diffuse structural alterations such as fibrosis, provid-
eation was found more accurate when heart rate variations
ed that the longitudinal relaxation time T1 can be mapped
were taken into account compared with the use of the
quantitatively. As another contrast mechanism, manganese-
original prospectively obtained inversion times.
enhanced MRI (MEMRI) provides interesting insights, par-
ASL in rodent myocardium has relatively good sensitivity
ticularly in ion transport into cells. In both contexts, accurate
mainly because MBF and heart rates in rodents are roughly
and rapid T1 mapping techniques dedicated to small animals
five times higher than in human myocardium, and the
are advantageous and have therefore been in the focus of
magnetic fields used in rodent studies are generally
method studies. One study obtained single-slice T1 maps
strong leading to relatively long relaxation times, both
with good accuracy from mice by reconsidering saturation-
directly influencing the perfusion signal. These conditions
recovery look-locker FLASH. The maps could be acquired
and the fact that, for the same reasons, bolus tracking is more
within 3 min, since no long recovery until full relaxation is
difficult than in humans, have contributed to the success of the
required between the inversion-recovery acquisitions [
ASL technique when applied to the rodent heart. On the other
Another step toward improving T1 mapping speed was
hand, ASL measurements are relatively time-consuming since
made by employing self-gating and a 3D-driven equilibrium
sufficient spatial and temporal resolutions are required to
FLASH technique (DESPOT) with five different flip angles
accurately separate the endocardial border from the left-
•]. While self-gating as a retrospective technique ensured
ventricular blood, whose high ASL signal would contaminate
a stable steady-state, the influence of through-plane motion
the MBF signal measured in the myocardium. This has until
on regional saturation could be avoided by using a large
now required small time windows within the cardiac cycle and
excitation slab, which in 3D imaging covers more than the
therefore a high number of experiment repetitions. Parallel
entire heart. Each of the five 3D datasets was acquired
imaging might in the future allow for scan time reductions
within 10 min, and the reproducibility was shown to be
without loss in spatial resolution, particularly for this
If in contrast-agent studies good temporal resolution and
Nevertheless, for a fast regional assessment of perfusion,
acquisition efficiency is needed instead of quantitative
and in infarction models in particular, first-pass bolus track-
aspects, the contrast obtained with standard cine-FLASH
ing might deliver sufficient information with the advantage
may be sufficient. Notably black-blood contrast obtained
of a faster acquisition. In the past year, two groups have
by saturation pulses followed by flow spoilers has been
independently reported successful myocardial first-pass per-
shown to give information on manganese contrast uptake
fusion measurements in mice using k-t-acceleration or ac-
dynamics with good temporal resolution [Revisiting the
celerated parallel detection •, •], thereby implicitly
initial use of LGE for infarct size determination, a study by
Curr Cardiovasc Imaging Rep (2012) 5:109–115
Protti et al. [yielded that in mice, the commonly
vivo in small animals challenging. Nevertheless, the assess-
employed inversion-recovery FLASH was not better than
ment of cardiac high-energy phosphates such as phospho-
standard cine-FLASH at a field strength of 7T, when com-
creatine and adenosine triphosphate (ATP) has been setup
paring infarct delineation to histology. A protocol combin-
and applied to mouse models []. More recently, Gupta
ing LGE and global function assessment might therefore be
and coworkers ] reported the measurement of ATP
accelerated by assessing both modalities with a single cine-
kinetics in failing mouse hearts using a triple repetition time
saturation transfer technique initially introduced in humans
Since necrosis also affects tissue T2, this parameter is
useful for MI characterization. In this scope, a preparation-
An interesting research path has been opened by using 19
module–based T2-weighted [] sequence was developed
F MRI of fluorinated compounds. Many compounds used in
using an adiabatic MLEV approach with good robustness
today’s biomedicine indeed contain fluorine and can be
against B0 and B1 heterogeneities, which were found signifi-
monitored with 19 F-MRI ]. This way, many fluorinated
cant at 7T. The authors applied the sequence to a murine
molecules such as perflurocarbons become an interesting
infarction model and found sufficient contrast to delineate
new class of contrast agents for MR with the advantage that
the infarcted area with good precision. T2-weighted MRI is
no non-relevant image signal is overlaid, because no native
therefore a totally noninvasive alternative to LGE MRI or a
19 F background is in the body. The 19 F MR signal is
complement providing supplemental characterization.
therefore qualified as robust and very specific despite lowersensitivity than the proton signal from water. As a recent
example, imaging of the accumulation of emulsified per-fluorocarbons by monocytes and macrophages has been
Diffusion MRI is based on MR signal weighting by the
used by Flögel et al. ] to early depict allograft rejection
Brownian (random) motion of molecules across an external-
and to monitor rejection therapy in a heterotopic transplan-
ly applied dephasing and rephasing magnetic field gradient.
tation mouse model. Another new MR application field was
Since molecular motion in tissue is restricted by cell mem-
opened by the possibility to increase the signal of the 13 C
branes, the measured diffusion tensor is representative for
nucleus by four orders of magnitude using hyperpolariza-
tissue structure in general and myocardial fiber geometry in
tion, and to give direct access to study metabolites relevant
particular. Diffusion MRI of the heart as a moving organ has
in the Krebs cycle as well as a number of derivates. 13 C
been a challenge for both clinical and preclinical MR com-
spectra contain information about lactate, pyruvate hydrate,
munities, since the cardiac motion itself influences the mea-
alanine, pyruvate, and bicarbonate. A recent study
surement of the Brownian motion to a very high degree, if
investigated the effect of hyperthyroidism on cardiac hyper-
not compensated for appropriately. To date, the majority of
trophy in a rat model using 13 C spectroscopy in vivo. From
animal studies found in the literature were therefore carried
their measurements, the authors calculated a twofold re-
out on excised and/or fixed myocardium providing insight
duced pyruvate dehydrogenase flux in hyperthyroid animals
into fiber architecture and its changes mainly in mouse and
versus controls and thereby showed that inhibition of glu-
swine models. The main focus of fiber organization studies
cose oxidation in hypertrophy is mediated by pyruvate de-
has been MI and tissue remodeling, but changes in fiber
hydrogenase kinase, providing a potential target for therapy.
orientation might also represent an interesting parameter for
The chemical shift of certain carbon compounds is depen-
studying non-ischemic cardiomyopathies. Excellent over-
dent on pH and therefore represents a tool to determine
views of the status of ex vivo and in vivo myocardial
intracellular pH non-invasively ]. Beyond non-localized
diffusion MRI in animals and humans were published re-
spectroscopy, MR chemical shift imaging (CSI) is able to
cently by Huang et al. [and Sosnovik et al. [who
provide spatial distribution maps of metabolites, and dedi-
have also been able to obtain diffusion MRI data from
cated sequence development addressing the needs of hyper-
polarized 13 C CSI is ongoing although recently in largeranimal models ]. A comprehensive review specifically
addressing hyperpolarized MR to the heart has been pub-lished by Tyler [].
As a unique technique, MR can record and use signalscoming from other nuclei than the proton opening accessto more complex molecules implied in cell metabolism
directly. Due to the comparatively low sensitivity of MRIand the low concentrations of metabolites compared to the
The application field of small-animal in vivo CMR covers
water used in conventional MRI, non-proton MR is limited
MI, heart failure, stem-cell tracking, and the study of car-
in temporal and spatial resolution, which makes its use in
diovascular dysfunction in gene-manipulated mice, often
Curr Cardiovasc Imaging Rep (2012) 5:109–115
associated with therapeutic monitoring. Although this review’s
new growth-factor combination for heart failure treatment
main objective is to give an MR method overview, and since
Hiller and coworkers [] evaluated the effect of
many of the method developments cited above are accompa-
angiotensin-converting enzyme (ACE) inhibition by quinapril
nied by a direct application, we will in the following also briefly
in a mouse infarction model. They collected a complex dataset
summarize a selected set of applications employing MRI
with multimodal MRI including myocardial blood flow and
volume, cine-imaging, as well as perfused-heart coronaryangiography, leading to the conclusion that not only function,
Stem-Cell Tracking and Evaluation of Therapy
but also microcirculation was improved by the ACE inhibitionapproach.
Qiao et al. have used MRI to depict SPIO-labeled em-bryonic stem cells delivered after myocardial infarction in rats. The extent of MI in the myocardium was determined using
LGE. They monitored myocardial recovery with cine-MRIand DENSE and were thereby able to demonstrate bene-
In this review, we have summarized active developments for
fits of the embryonic stem-cell therapy. An alternative track-
small-animal CMR based on the literature over the past
ing strategy was based on the use of human ferritin heavy
2 years. Not only method development, but also the interest
chain as a paramagnetic reporter gene ]. The authors
of the biomedical community in small-animal CMR has been
modified swine cardiac stem cells to over-express this gene.
rapidly growing over the last years, confirming this technique
A multi-gradient echo sequence on a clinical 1.5T system was
as a powerful noninvasive research tool. Indeed, the availability
used to locate the ferritin-overexpressing injected cells in rats
of new methods has led to an impressive number of application
with MI. Another study ] used cine-imaging to demon-
studies in which small-animal in vivo MR has played a signif-
strate that a novel form of microvascular stem cell graft matrix
icant role. With the cited recent developments one can expect
effectively preserved contractile performance after myocardial
this trend to become even stronger in the future. Readers only
infarction, attenuated left ventricular dilation, and decreased
familiar with clinical CMR will have noticed that all clinically
available magnetic resonance measurements have their equiv-alent in small-animal MRI available, but that in many cases not
only specific parameters, but also sequence strategies dedicatedto the rodent’s cardiovascular system are needed. This does not
In the light of the recent finding that apoptosis is reversible
appear surprising when keeping in mind not only the spatial
in certain circumstances, CMR as a totally non-invasive tool
dimension differences of up to three orders of magnitude, but
appears particularly attractive. Extremely sensitive MRI-
also the differences in flow velocities and motion. Despite this,
markers of apoptosis have been developed in the past ],
a number of clinical method developments can be expected to
and a recent study ] carried out on a 3T clinical MRI
benefit from the experience made with small animal techni-
system has reported successful monitoring of apoptosis in a
ques, such as the setup of spin-labeling perfusion techniques.
specific heart disease rat model (doxorubicin cardiomyopa-
But one also notices transfer of technology from clinical sys-
thy), in which apoptosis occurs only at a moderate degree. A
tems toward small-animal systems, which in turn demonstrates
major result has been obtained from a rat study using MRI
the active exchange between communities both ways.
for tracking iron-oxide labeled phosphorylseline-presentingliposomes that are accumulated by macrophages present in
No potential conflicts of interest relevant to this article
the infarct zone after MI •]. The authors used these lip-
osomes to mimic apoptosis, which in turn had been shownto play a role in limiting the extent of inflammation afterinfarction.
Other MR Applications for Therapeutic Monitoringor Genetic Characterization
Papers of particular interest, published recently, have beenhighlighted as:
The majority of model characterization studies still relied on
using cine-imaging for assessing global function []. However, perfusion and other parameters are entering routine
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Vulnerable patients with a fractured neck of femur:nutritional status and support in hospitalM. Nematy,* M. Hickson,* A.E. Brynes,* C.H.S. Ruxton & G.S. Frost**Nutrition and Dietetic Research Group, Imperial College London, Hammersmith Hospitals Trust, London W12 0HS, UK; Schoolof Biosciences, University of Westminster, London W1W 6UW, UKMalnutrition has serious consequences forrecover